J7_3CXC_001

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAAAC*GACC*GAUUCCG*CAGGAG*CAGAG*CC*GAGUAG

Length

36 nucleotides

Bulged bases

3CXC|1|0|C|1044

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CXC|1|0|C|910
3CXC|1|0|G|911
3CXC|1|0|A|912
3CXC|1|0|A|913
3CXC|1|0|A|914
3CXC|1|0|C|915
*
3CXC|1|0|G|928
3CXC|1|0|A|929
3CXC|1|0|C|930
3CXC|1|0|C|931
*
3CXC|1|0|G|1039
3CXC|1|0|A|1040
3CXC|1|0|U|1041
3CXC|1|0|U|1042
3CXC|1|0|C|1043
3CXC|1|0|C|1044
3CXC|1|0|G|1045
*
3CXC|1|0|C|1069
3CXC|1|0|A|1070
3CXC|1|0|G|1071
3CXC|1|0|G|1072
3CXC|1|0|A|1073
3CXC|1|0|G|1074
*
3CXC|1|0|C|1085
3CXC|1|0|A|1086
3CXC|1|0|G|1087
3CXC|1|0|A|1088
3CXC|1|0|G|1089
*
3CXC|1|0|C|1267
3CXC|1|0|C|1268
*
3CXC|1|0|G|1290
3CXC|1|0|A|1291
3CXC|1|0|G|1292
3CXC|1|0|U|1293
3CXC|1|0|A|1294
3CXC|1|0|G|1295

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 9

5S ribosomal RNA; 5S rRNA

Chain K

RIBOSOMAL PROTEIN L15

Chain P

RIBOSOMAL PROTEIN L21E

Chain V

RIBOSOMAL PROTEIN L30

Chain X

RIBOSOMAL PROTEIN L32E