3D structure

PDB id
3G4S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGAAAC*GACC*GAUUCCG*CAGGAG*CAGAG*CC*GAGUAG
Length
36 nucleotides
Bulged bases
3G4S|1|0|C|1044
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3G4S|1|0|C|910
3G4S|1|0|G|911
3G4S|1|0|A|912
3G4S|1|0|A|913
3G4S|1|0|A|914
3G4S|1|0|C|915
*
3G4S|1|0|G|928
3G4S|1|0|A|929
3G4S|1|0|C|930
3G4S|1|0|C|931
*
3G4S|1|0|G|1039
3G4S|1|0|A|1040
3G4S|1|0|U|1041
3G4S|1|0|U|1042
3G4S|1|0|C|1043
3G4S|1|0|C|1044
3G4S|1|0|G|1045
*
3G4S|1|0|C|1069
3G4S|1|0|A|1070
3G4S|1|0|G|1071
3G4S|1|0|G|1072
3G4S|1|0|A|1073
3G4S|1|0|G|1074
*
3G4S|1|0|C|1085
3G4S|1|0|A|1086
3G4S|1|0|G|1087
3G4S|1|0|A|1088
3G4S|1|0|G|1089
*
3G4S|1|0|C|1267
3G4S|1|0|C|1268
*
3G4S|1|0|G|1290
3G4S|1|0|A|1291
3G4S|1|0|G|1292
3G4S|1|0|U|1293
3G4S|1|0|A|1294
3G4S|1|0|G|1295

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain 9
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15P
Chain W
50S ribosomal protein L30P
Chain Y
50S ribosomal protein L32e

Coloring options:

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