J7_3J6B_001
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUAAAG*UAUAAGC*GAAAUC*GUAC*GAAAUAU*AUUA*UUA
- Length
- 38 nucleotides
- Bulged bases
- 3J6B|1|A|A|1921, 3J6B|1|A|U|2896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J6B|1|A|U|43
3J6B|1|A|U|44
3J6B|1|A|U|45
3J6B|1|A|A|46
3J6B|1|A|A|47
3J6B|1|A|A|48
3J6B|1|A|G|49
*
3J6B|1|A|U|422
3J6B|1|A|A|423
3J6B|1|A|U|424
3J6B|1|A|A|425
3J6B|1|A|A|426
3J6B|1|A|G|427
3J6B|1|A|C|428
*
3J6B|1|A|G|1918
3J6B|1|A|A|1919
3J6B|1|A|A|1920
3J6B|1|A|A|1921
3J6B|1|A|U|1922
3J6B|1|A|C|1923
*
3J6B|1|A|G|1940
3J6B|1|A|U|1941
3J6B|1|A|A|1942
3J6B|1|A|C|1943
*
3J6B|1|A|G|2892
3J6B|1|A|A|2893
3J6B|1|A|A|2894
3J6B|1|A|A|2895
3J6B|1|A|U|2896
3J6B|1|A|A|2897
3J6B|1|A|U|2898
*
3J6B|1|A|A|3120
3J6B|1|A|U|3121
3J6B|1|A|U|3122
3J6B|1|A|A|3123
*
3J6B|1|A|U|3260
3J6B|1|A|U|3261
3J6B|1|A|A|3262
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain 5
- 54S ribosomal protein L3, mitochondrial
- Chain C
- 54S ribosomal protein L9, mitochondrial
- Chain H
- 54S ribosomal protein L23, mitochondrial
- Chain L
- 54S ribosomal protein L8, mitochondrial
- Chain M
- 54S ribosomal protein IMG1, mitochondrial
- Chain N
- 54S ribosomal protein L49, mitochondrial
- Chain O
- 54S ribosomal protein L22, mitochondrial
- Chain W
- 54S ribosomal protein L32, mitochondrial
- Chain a
- 54S ribosomal protein L20, mitochondrial
Coloring options: