J7_3J71_001
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCGAAGUUUC*GAUAGCUG*CUAGUGGGCCACU*ACUGGCGCUGCG*CGAACGCC*GGCCGUC*GACGAGUAGG
- Length
- 68 nucleotides
- Bulged bases
- 3J71|1|5|G|2278
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|C|1665
3J71|1|5|C|1666
3J71|1|5|G|1667
3J71|1|5|A|1668
3J71|1|5|A|1669
3J71|1|5|G|1670
3J71|1|5|U|1671
3J71|1|5|U|1672
3J71|1|5|U|1673
3J71|1|5|C|1674
*
3J71|1|5|G|1681
3J71|1|5|A|1682
3J71|1|5|U|1683
3J71|1|5|A|1684
3J71|1|5|G|1685
3J71|1|5|C|1686
3J71|1|5|U|1687
3J71|1|5|G|1688
*
3J71|1|5|C|1848
3J71|1|5|U|1849
3J71|1|5|A|1850
3J71|1|5|G|1851
3J71|1|5|U|1852
3J71|1|5|G|1853
3J71|1|5|G|1854
3J71|1|5|G|1855
3J71|1|5|C|1856
3J71|1|5|C|1857
3J71|1|5|A|1858
3J71|1|5|C|1859
3J71|1|5|U|1860
*
3J71|1|5|A|1874
3J71|1|5|C|1875
3J71|1|5|U|1876
3J71|1|5|G|1877
3J71|1|5|G|1878
3J71|1|5|C|1879
3J71|1|5|G|1880
3J71|1|5|C|1881
3J71|1|5|U|1882
3J71|1|5|G|1883
3J71|1|5|C|1884
3J71|1|5|G|1885
*
3J71|1|5|C|1894
3J71|1|5|G|1895
3J71|1|5|A|1896
3J71|1|5|A|1897
3J71|1|5|C|1898
3J71|1|5|G|1899
3J71|1|5|C|1900
3J71|1|5|C|1901
*
3J71|1|5|G|2075
3J71|1|5|G|2076
3J71|1|5|C|2077
3J71|1|5|C|2078
3J71|1|5|G|2079
3J71|1|5|U|2080
3J71|1|5|C|2081
*
3J71|1|5|G|2275
3J71|1|5|A|2276
3J71|1|5|C|2277
3J71|1|5|G|2278
3J71|1|5|A|2279
3J71|1|5|G|2280
3J71|1|5|U|2281
3J71|1|5|A|2282
3J71|1|5|G|2283
3J71|1|5|G|2284
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain C
- Ribosomal protein uL4
- Chain F
- Ribosomal protein uL30
- Chain L
- Ribosomal protein eL13
- Chain Q
- Ribosomal protein eL18
- Chain T
- Ribosomal protein eL21
- Chain a
- Ribosomal protein uL15
- Chain b
- Ribosomal protein eL29
- Chain e
- Ribosomal protein eL32
- Chain f
- Ribosomal protein eL33
Coloring options: