J7_3J7R_002
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAAGUUUC*GAUAG*UGGG*CGCUGCG*CGAACGCC*GGCCGUC*GACGAGUAG
- Length
- 49 nucleotides
- Bulged bases
- 3J7R|1|5|G|1854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|5|C|1666
3J7R|1|5|G|1667
3J7R|1|5|A|1668
3J7R|1|5|A|1669
3J7R|1|5|G|1670
3J7R|1|5|U|1671
3J7R|1|5|U|1672
3J7R|1|5|U|1673
3J7R|1|5|C|1674
*
3J7R|1|5|G|1681
3J7R|1|5|A|1682
3J7R|1|5|U|1683
3J7R|1|5|A|1684
3J7R|1|5|G|1685
*
3J7R|1|5|U|1852
3J7R|1|5|G|1853
3J7R|1|5|G|1854
3J7R|1|5|G|1855
*
3J7R|1|5|C|1879
3J7R|1|5|G|1880
3J7R|1|5|C|1881
3J7R|1|5|U|1882
3J7R|1|5|G|1883
3J7R|1|5|C|1884
3J7R|1|5|G|1885
*
3J7R|1|5|C|1894
3J7R|1|5|G|1895
3J7R|1|5|A|1896
3J7R|1|5|A|1897
3J7R|1|5|C|1898
3J7R|1|5|G|1899
3J7R|1|5|C|1900
3J7R|1|5|C|1901
*
3J7R|1|5|G|2075
3J7R|1|5|G|2076
3J7R|1|5|C|2077
3J7R|1|5|C|2078
3J7R|1|5|G|2079
3J7R|1|5|U|2080
3J7R|1|5|C|2081
*
3J7R|1|5|G|2275
3J7R|1|5|A|2276
3J7R|1|5|C|2277
3J7R|1|5|G|2278
3J7R|1|5|A|2279
3J7R|1|5|G|2280
3J7R|1|5|U|2281
3J7R|1|5|A|2282
3J7R|1|5|G|2283
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain C
- Ribosomal protein uL4
- Chain F
- Ribosomal protein uL30
- Chain L
- Ribosomal protein eL13
- Chain Q
- Ribosomal protein eL18
- Chain T
- Ribosomal protein eL21
- Chain a
- Ribosomal protein uL15
- Chain b
- Ribosomal protein eL29
- Chain e
- Ribosomal protein eL32
- Chain f
- Ribosomal protein eL33
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