3D structure

PDB id
3J7Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli 50S subunit with ErmCL nascent chain
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
3J7Z|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7Z|1|A|C|817
3J7Z|1|A|G|818
3J7Z|1|A|A|819
3J7Z|1|A|A|820
3J7Z|1|A|A|821
3J7Z|1|A|G|822
*
3J7Z|1|A|C|835
3J7Z|1|A|G|836
3J7Z|1|A|C|837
*
3J7Z|1|A|G|942
3J7Z|1|A|A|943
3J7Z|1|A|C|944
3J7Z|1|A|A|945
3J7Z|1|A|C|946
*
3J7Z|1|A|G|971
3J7Z|1|A|A|972
3J7Z|1|A|A|973
3J7Z|1|A|G|974
3J7Z|1|A|A|975
3J7Z|1|A|G|976
*
3J7Z|1|A|C|987
3J7Z|1|A|A|988
3J7Z|1|A|G|989
3J7Z|1|A|A|990
3J7Z|1|A|C|991
*
3J7Z|1|A|G|1163
3J7Z|1|A|C|1164
*
3J7Z|1|A|G|1185
3J7Z|1|A|G|1186
3J7Z|1|A|G|1187
3J7Z|1|A|U|1188
3J7Z|1|A|A|1189
3J7Z|1|A|G|1190

Current chains

Chain A
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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