J7_3J9Y_002
3D structure
- PDB id
- 3J9Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 33 nucleotides
- Bulged bases
- 3J9Y|1|A|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9Y|1|A|C|817
3J9Y|1|A|G|818
3J9Y|1|A|A|819
3J9Y|1|A|A|820
3J9Y|1|A|A|821
3J9Y|1|A|G|822
*
3J9Y|1|A|C|835
3J9Y|1|A|G|836
3J9Y|1|A|C|837
*
3J9Y|1|A|G|942
3J9Y|1|A|A|943
3J9Y|1|A|C|944
3J9Y|1|A|A|945
3J9Y|1|A|C|946
*
3J9Y|1|A|G|971
3J9Y|1|A|A|972
3J9Y|1|A|A|973
3J9Y|1|A|G|974
3J9Y|1|A|A|975
3J9Y|1|A|G|976
*
3J9Y|1|A|C|987
3J9Y|1|A|A|988
3J9Y|1|A|G|989
3J9Y|1|A|A|990
3J9Y|1|A|C|991
*
3J9Y|1|A|G|1163
3J9Y|1|A|C|1164
*
3J9Y|1|A|G|1185
3J9Y|1|A|G|1186
3J9Y|1|A|G|1187
3J9Y|1|A|U|1188
3J9Y|1|A|A|1189
3J9Y|1|A|G|1190
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain L
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain Z
- 50S ribosomal protein L30
Coloring options: