J7_3JAJ_001
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCGAAGUUUC*GAUAG*UGGGCCACU*ACUGGCGCUGCGG*CCGAACGCC*GGCCGUC*GACGAGUAGG
- Length
- 63 nucleotides
- Bulged bases
- 3JAJ|1|5|G|1854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|C|1665
3JAJ|1|5|C|1666
3JAJ|1|5|G|1667
3JAJ|1|5|A|1668
3JAJ|1|5|A|1669
3JAJ|1|5|G|1670
3JAJ|1|5|U|1671
3JAJ|1|5|U|1672
3JAJ|1|5|U|1673
3JAJ|1|5|C|1674
*
3JAJ|1|5|G|1681
3JAJ|1|5|A|1682
3JAJ|1|5|U|1683
3JAJ|1|5|A|1684
3JAJ|1|5|G|1685
*
3JAJ|1|5|U|1852
3JAJ|1|5|G|1853
3JAJ|1|5|G|1854
3JAJ|1|5|G|1855
3JAJ|1|5|C|1856
3JAJ|1|5|C|1857
3JAJ|1|5|A|1858
3JAJ|1|5|C|1859
3JAJ|1|5|U|1860
*
3JAJ|1|5|A|1874
3JAJ|1|5|C|1875
3JAJ|1|5|U|1876
3JAJ|1|5|G|1877
3JAJ|1|5|G|1878
3JAJ|1|5|C|1879
3JAJ|1|5|G|1880
3JAJ|1|5|C|1881
3JAJ|1|5|U|1882
3JAJ|1|5|G|1883
3JAJ|1|5|C|1884
3JAJ|1|5|G|1885
3JAJ|1|5|G|1886
*
3JAJ|1|5|C|1893
3JAJ|1|5|C|1894
3JAJ|1|5|G|1895
3JAJ|1|5|A|1896
3JAJ|1|5|A|1897
3JAJ|1|5|C|1898
3JAJ|1|5|G|1899
3JAJ|1|5|C|1900
3JAJ|1|5|C|1901
*
3JAJ|1|5|G|2075
3JAJ|1|5|G|2076
3JAJ|1|5|C|2077
3JAJ|1|5|C|2078
3JAJ|1|5|G|2079
3JAJ|1|5|U|2080
3JAJ|1|5|C|2081
*
3JAJ|1|5|G|2275
3JAJ|1|5|A|2276
3JAJ|1|5|C|2277
3JAJ|1|5|G|2278
3JAJ|1|5|A|2279
3JAJ|1|5|G|2280
3JAJ|1|5|U|2281
3JAJ|1|5|A|2282
3JAJ|1|5|G|2283
3JAJ|1|5|G|2284
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain C
- Ribosomal protein uL4
- Chain F
- Ribosomal protein uL30
- Chain L
- Ribosomal protein eL13
- Chain Q
- Ribosomal protein eL18
- Chain T
- Ribosomal protein eL21
- Chain a
- Ribosomal protein uL15
- Chain b
- Ribosomal protein eL29
- Chain e
- Ribosomal protein eL32
- Chain f
- Ribosomal protein eL33
Coloring options: