3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
Length
32 nucleotides
Bulged bases
4LEL|1|RA|G|944, 4LEL|1|RA|A|945, 4LEL|1|RA|C|974|||A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LEL|1|RA|C|817
4LEL|1|RA|G|818
4LEL|1|RA|A|819
4LEL|1|RA|A|820
4LEL|1|RA|A|821
4LEL|1|RA|U|822
*
4LEL|1|RA|A|835
4LEL|1|RA|G|836
*
4LEL|1|RA|U|943
4LEL|1|RA|G|944
4LEL|1|RA|A|945
4LEL|1|RA|G|946
*
4LEL|1|RA|C|971
4LEL|1|RA|G|972
4LEL|1|RA|A|973
4LEL|1|RA|G|974
4LEL|1|RA|C|974|||A
4LEL|1|RA|G|975
4LEL|1|RA|C|976
*
4LEL|1|RA|G|987
4LEL|1|RA|A|988
4LEL|1|RA|G|989
4LEL|1|RA|A|990
4LEL|1|RA|C|991
*
4LEL|1|RA|G|1163
4LEL|1|RA|G|1164
*
4LEL|1|RA|C|1185
4LEL|1|RA|G|1186
4LEL|1|RA|G|1187
4LEL|1|RA|U|1188
4LEL|1|RA|A|1189
4LEL|1|RA|G|1190

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L30
Chain R8
50S ribosomal protein L35
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RP
50S ribosomal protein L15
Chain RU
50S ribosomal protein L20
Chain RV
50S ribosomal protein L21

Coloring options:

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