3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
Length
35 nucleotides
Bulged bases
4LEL|1|YA|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LEL|1|YA|A|8
4LEL|1|YA|U|9
4LEL|1|YA|G|10
4LEL|1|YA|G|11
4LEL|1|YA|U|12
4LEL|1|YA|A|13
4LEL|1|YA|A|14
4LEL|1|YA|G|15
*
4LEL|1|YA|U|525
4LEL|1|YA|A|526
4LEL|1|YA|C|527
4LEL|1|YA|A|528
4LEL|1|YA|A|529
4LEL|1|YA|G|530
4LEL|1|YA|C|531
*
4LEL|1|YA|G|2018
4LEL|1|YA|A|2019
4LEL|1|YA|A|2020
4LEL|1|YA|C|2021
4LEL|1|YA|U|2022
4LEL|1|YA|G|2023
*
4LEL|1|YA|C|2040
4LEL|1|YA|U|2041
4LEL|1|YA|A|2042
4LEL|1|YA|C|2043
*
4LEL|1|YA|G|2625
4LEL|1|YA|C|2626
4LEL|1|YA|G|2627
4LEL|1|YA|C|2628
4LEL|1|YA|A|2629
4LEL|1|YA|G|2630
*
4LEL|1|YA|C|2788
4LEL|1|YA|C|2789
*
4LEL|1|YA|G|2894
4LEL|1|YA|U|2895

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain YE
50S ribosomal protein L3
Chain YN
50S ribosomal protein L13
Chain YU
50S ribosomal protein L20
Chain YW
50S ribosomal protein L22

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1513 s