3D structure

PDB id
4LT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
Length
35 nucleotides
Bulged bases
4LT8|1|RA|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LT8|1|RA|A|8
4LT8|1|RA|U|9
4LT8|1|RA|G|10
4LT8|1|RA|G|11
4LT8|1|RA|U|12
4LT8|1|RA|A|13
4LT8|1|RA|A|14
4LT8|1|RA|G|15
*
4LT8|1|RA|U|525
4LT8|1|RA|A|526
4LT8|1|RA|C|527
4LT8|1|RA|A|528
4LT8|1|RA|A|529
4LT8|1|RA|G|530
4LT8|1|RA|C|531
*
4LT8|1|RA|G|2018
4LT8|1|RA|A|2019
4LT8|1|RA|A|2020
4LT8|1|RA|C|2021
4LT8|1|RA|U|2022
4LT8|1|RA|G|2023
*
4LT8|1|RA|C|2040
4LT8|1|RA|U|2041
4LT8|1|RA|A|2042
4LT8|1|RA|C|2043
*
4LT8|1|RA|G|2625
4LT8|1|RA|C|2626
4LT8|1|RA|G|2627
4LT8|1|RA|C|2628
4LT8|1|RA|A|2629
4LT8|1|RA|G|2630
*
4LT8|1|RA|C|2788
4LT8|1|RA|C|2789
*
4LT8|1|RA|G|2894
4LT8|1|RA|U|2895

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R5
50S ribosomal protein L32
Chain RE
50S ribosomal protein L3
Chain RN
50S ribosomal protein L11
Chain RU
50S ribosomal protein L19
Chain RW
50S ribosomal protein L21

Coloring options:

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