3D structure

PDB id
4LT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
Length
32 nucleotides
Bulged bases
4LT8|1|RA|A|945, 4LT8|1|RA|C|974|||A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LT8|1|RA|C|817
4LT8|1|RA|G|818
4LT8|1|RA|A|819
4LT8|1|RA|A|820
4LT8|1|RA|A|821
4LT8|1|RA|U|822
*
4LT8|1|RA|A|835
4LT8|1|RA|G|836
*
4LT8|1|RA|U|943
4LT8|1|RA|G|944
4LT8|1|RA|A|945
4LT8|1|RA|G|946
*
4LT8|1|RA|C|971
4LT8|1|RA|G|972
4LT8|1|RA|A|973
4LT8|1|RA|G|974
4LT8|1|RA|C|974|||A
4LT8|1|RA|G|975
4LT8|1|RA|C|976
*
4LT8|1|RA|G|987
4LT8|1|RA|A|988
4LT8|1|RA|G|989
4LT8|1|RA|A|990
4LT8|1|RA|C|991
*
4LT8|1|RA|G|1163
4LT8|1|RA|G|1164
*
4LT8|1|RA|C|1185
4LT8|1|RA|G|1186
4LT8|1|RA|G|1187
4LT8|1|RA|U|1188
4LT8|1|RA|A|1189
4LT8|1|RA|G|1190

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L29
Chain R8
50S ribosomal protein L35
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RP
50S ribosomal protein L14
Chain RU
50S ribosomal protein L19
Chain RV
50S ribosomal protein L20

Coloring options:

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