3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
Length
32 nucleotides
Bulged bases
4P70|1|RA|A|945, 4P70|1|RA|C|974|||A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4P70|1|RA|C|817
4P70|1|RA|G|818
4P70|1|RA|A|819
4P70|1|RA|A|820
4P70|1|RA|A|821
4P70|1|RA|U|822
*
4P70|1|RA|A|835
4P70|1|RA|G|836
*
4P70|1|RA|U|943
4P70|1|RA|G|944
4P70|1|RA|A|945
4P70|1|RA|G|946
*
4P70|1|RA|C|971
4P70|1|RA|G|972
4P70|1|RA|A|973
4P70|1|RA|G|974
4P70|1|RA|C|974|||A
4P70|1|RA|G|975
4P70|1|RA|C|976
*
4P70|1|RA|G|987
4P70|1|RA|A|988
4P70|1|RA|G|989
4P70|1|RA|A|990
4P70|1|RA|C|991
*
4P70|1|RA|G|1163
4P70|1|RA|G|1164
*
4P70|1|RA|C|1185
4P70|1|RA|G|1186
4P70|1|RA|G|1187
4P70|1|RA|U|1188
4P70|1|RA|A|1189
4P70|1|RA|G|1190

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L30
Chain R8
50S ribosomal protein L35
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RP
50S ribosomal protein L15
Chain RU
50S ribosomal protein L20
Chain RV
50S ribosomal protein L21

Coloring options:

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