3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
Length
35 nucleotides
Bulged bases
4P70|1|YA|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4P70|1|YA|A|8
4P70|1|YA|U|9
4P70|1|YA|G|10
4P70|1|YA|G|11
4P70|1|YA|U|12
4P70|1|YA|A|13
4P70|1|YA|A|14
4P70|1|YA|G|15
*
4P70|1|YA|U|525
4P70|1|YA|A|526
4P70|1|YA|C|527
4P70|1|YA|A|528
4P70|1|YA|A|529
4P70|1|YA|G|530
4P70|1|YA|C|531
*
4P70|1|YA|G|2018
4P70|1|YA|A|2019
4P70|1|YA|A|2020
4P70|1|YA|C|2021
4P70|1|YA|U|2022
4P70|1|YA|G|2023
*
4P70|1|YA|C|2040
4P70|1|YA|U|2041
4P70|1|YA|A|2042
4P70|1|YA|C|2043
*
4P70|1|YA|G|2625
4P70|1|YA|C|2626
4P70|1|YA|G|2627
4P70|1|YA|C|2628
4P70|1|YA|A|2629
4P70|1|YA|G|2630
*
4P70|1|YA|C|2788
4P70|1|YA|C|2789
*
4P70|1|YA|G|2894
4P70|1|YA|U|2895

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain YE
50S ribosomal protein L3
Chain YN
50S ribosomal protein L13
Chain YU
50S ribosomal protein L20
Chain YW
50S ribosomal protein L22

Coloring options:

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