3D structure

PDB id
4TUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
Length
35 nucleotides
Bulged bases
4TUA|1|YA|G|530, 4TUA|1|YA|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4TUA|1|YA|A|8
4TUA|1|YA|U|9
4TUA|1|YA|G|10
4TUA|1|YA|G|11
4TUA|1|YA|U|12
4TUA|1|YA|A|13
4TUA|1|YA|A|14
4TUA|1|YA|G|15
*
4TUA|1|YA|U|525
4TUA|1|YA|A|526
4TUA|1|YA|C|527
4TUA|1|YA|A|528
4TUA|1|YA|A|529
4TUA|1|YA|G|530
4TUA|1|YA|C|531
*
4TUA|1|YA|G|2018
4TUA|1|YA|A|2019
4TUA|1|YA|A|2020
4TUA|1|YA|C|2021
4TUA|1|YA|U|2022
4TUA|1|YA|G|2023
*
4TUA|1|YA|C|2040
4TUA|1|YA|U|2041
4TUA|1|YA|A|2042
4TUA|1|YA|C|2043
*
4TUA|1|YA|G|2625
4TUA|1|YA|C|2626
4TUA|1|YA|G|2627
4TUA|1|YA|C|2628
4TUA|1|YA|A|2629
4TUA|1|YA|G|2630
*
4TUA|1|YA|C|2788
4TUA|1|YA|C|2789
*
4TUA|1|YA|G|2894
4TUA|1|YA|U|2895

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain YE
50S ribosomal protein L3
Chain YN
50S ribosomal protein L13
Chain YU
50S ribosomal protein L20
Chain YW
50S ribosomal protein L22

Coloring options:

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