3D structure

PDB id
4TUC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
Length
32 nucleotides
Bulged bases
4TUC|1|RA|A|945, 4TUC|1|RA|C|974|||A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4TUC|1|RA|C|817
4TUC|1|RA|G|818
4TUC|1|RA|A|819
4TUC|1|RA|A|820
4TUC|1|RA|A|821
4TUC|1|RA|U|822
*
4TUC|1|RA|A|835
4TUC|1|RA|G|836
*
4TUC|1|RA|U|943
4TUC|1|RA|G|944
4TUC|1|RA|A|945
4TUC|1|RA|G|946
*
4TUC|1|RA|C|971
4TUC|1|RA|G|972
4TUC|1|RA|A|973
4TUC|1|RA|G|974
4TUC|1|RA|C|974|||A
4TUC|1|RA|G|975
4TUC|1|RA|C|976
*
4TUC|1|RA|G|987
4TUC|1|RA|A|988
4TUC|1|RA|G|989
4TUC|1|RA|A|990
4TUC|1|RA|C|991
*
4TUC|1|RA|G|1163
4TUC|1|RA|G|1164
*
4TUC|1|RA|C|1185
4TUC|1|RA|G|1186
4TUC|1|RA|G|1187
4TUC|1|RA|U|1188
4TUC|1|RA|A|1189
4TUC|1|RA|G|1190

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L30
Chain R8
50S ribosomal protein L35
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RP
50S ribosomal protein L15
Chain RU
50S ribosomal protein L20
Chain RV
50S ribosomal protein L21

Coloring options:

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