J7_4U20_001

3D structure

PDB id

4U20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

4U20|1|BA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U20|1|BA|C|8
4U20|1|BA|G|9
4U20|1|BA|A|10
4U20|1|BA|C|11
4U20|1|BA|U|12
4U20|1|BA|A|13
4U20|1|BA|A|14
4U20|1|BA|G|15
*
4U20|1|BA|U|525
4U20|1|BA|A|526
4U20|1|BA|C|527
4U20|1|BA|A|528
4U20|1|BA|A|529
4U20|1|BA|G|530
4U20|1|BA|C|531
*
4U20|1|BA|G|2018
4U20|1|BA|A|2019
4U20|1|BA|A|2020
4U20|1|BA|C|2021
4U20|1|BA|U|2022
4U20|1|BA|C|2023
*
4U20|1|BA|G|2040
4U20|1|BA|U|2041
4U20|1|BA|A|2042
4U20|1|BA|C|2043
*
4U20|1|BA|G|2625
4U20|1|BA|C|2626
4U20|1|BA|G|2627
4U20|1|BA|C|2628
4U20|1|BA|U|2629
4U20|1|BA|G|2630
*
4U20|1|BA|C|2788
4U20|1|BA|C|2789
*
4U20|1|BA|G|2894
4U20|1|BA|G|2895

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BJ

50S ribosomal protein L13

Chain BQ

50S ribosomal protein L20

Chain BS

50S ribosomal protein L22