3D structure

PDB id
4U27 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to flopristin and linopristin.
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
4U27|1|BA|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4U27|1|BA|C|8
4U27|1|BA|G|9
4U27|1|BA|A|10
4U27|1|BA|C|11
4U27|1|BA|U|12
4U27|1|BA|A|13
4U27|1|BA|A|14
4U27|1|BA|G|15
*
4U27|1|BA|U|525
4U27|1|BA|A|526
4U27|1|BA|C|527
4U27|1|BA|A|528
4U27|1|BA|A|529
4U27|1|BA|G|530
4U27|1|BA|C|531
*
4U27|1|BA|G|2018
4U27|1|BA|A|2019
4U27|1|BA|A|2020
4U27|1|BA|C|2021
4U27|1|BA|U|2022
4U27|1|BA|C|2023
*
4U27|1|BA|G|2040
4U27|1|BA|U|2041
4U27|1|BA|A|2042
4U27|1|BA|C|2043
*
4U27|1|BA|G|2625
4U27|1|BA|C|2626
4U27|1|BA|G|2627
4U27|1|BA|C|2628
4U27|1|BA|U|2629
4U27|1|BA|G|2630
*
4U27|1|BA|C|2788
4U27|1|BA|C|2789
*
4U27|1|BA|G|2894
4U27|1|BA|G|2895

Current chains

Chain BA
23S rRNA

Nearby chains

Chain B0
50S ribosomal protein L32
Chain BD
50S ribosomal protein L3
Chain BJ
50S ribosomal protein L13
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BS
50S ribosomal protein L22

Coloring options:

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