Loop J7_4V4G

3D structure

PDB id: 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
Description: Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
Experimental method: X-RAY DIFFRACTION
Resolution: 11.5 Å

Loop

Sequence: CCGAAAU*AGCCU*GGAGUGAGGC*GCCGAGAG*CAGACC*GGAUUCA*UGUCUGGUAGG
Length: 54 nucleotides
Bulged bases: None detected
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4V4G|1|BB|C|829
4V4G|1|BB|C|830
4V4G|1|BB|G|831
4V4G|1|BB|A|832
4V4G|1|BB|A|833
4V4G|1|BB|A|834
4V4G|1|BB|U|835
*
4V4G|1|BB|A|848
4V4G|1|BB|G|849
4V4G|1|BB|C|850
4V4G|1|BB|C|851
4V4G|1|BB|U|852
*
4V4G|1|BB|G|950
4V4G|1|BB|G|951
4V4G|1|BB|A|952
4V4G|1|BB|G|953
4V4G|1|BB|U|954
4V4G|1|BB|G|955
4V4G|1|BB|A|956
4V4G|1|BB|G|957
4V4G|1|BB|G|958
4V4G|1|BB|C|959
*
4V4G|1|BB|G|980
4V4G|1|BB|C|981
4V4G|1|BB|C|982
4V4G|1|BB|G|983
4V4G|1|BB|A|984
4V4G|1|BB|G|985
4V4G|1|BB|A|986
4V4G|1|BB|G|987
*
4V4G|1|BB|C|998
4V4G|1|BB|A|999
4V4G|1|BB|G|1000
4V4G|1|BB|A|1001
4V4G|1|BB|C|1002
4V4G|1|BB|C|1003
*
4V4G|1|BB|G|1173
4V4G|1|BB|G|1174
4V4G|1|BB|A|1175
4V4G|1|BB|U|1176
4V4G|1|BB|U|1177
4V4G|1|BB|C|1178
4V4G|1|BB|A|1179
*
4V4G|1|BB|U|1195
4V4G|1|BB|G|1196
4V4G|1|BB|U|1197
4V4G|1|BB|C|1198
4V4G|1|BB|U|1199
4V4G|1|BB|G|1200
4V4G|1|BB|G|1201
4V4G|1|BB|U|1202
4V4G|1|BB|A|1203
4V4G|1|BB|G|1204
4V4G|1|BB|G|1205

Current chains

Chain BB: 23S RIBOSOMAL RNA

Nearby chains

Chain B5: 50S ribosomal protein L35
Chain BA: 5S ribosomal RNA; 5S rRNA
Chain BM: 50S ribosomal protein L15
Chain BR: 50S ribosomal protein L20
Chain BS: 50S ribosomal protein L21
Chain BZ: 50S ribosomal protein L30

J7_4V4G_001