J7_4V4G_007
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- CGAAAU*AGCC*GAGUGAG*CGAGAG*CAGAC*GAUUC*GUCUGGUAG
- Length
- 42 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4G|1|DB|C|830
4V4G|1|DB|G|831
4V4G|1|DB|A|832
4V4G|1|DB|A|833
4V4G|1|DB|A|834
4V4G|1|DB|U|835
*
4V4G|1|DB|A|848
4V4G|1|DB|G|849
4V4G|1|DB|C|850
4V4G|1|DB|C|851
*
4V4G|1|DB|G|951
4V4G|1|DB|A|952
4V4G|1|DB|G|953
4V4G|1|DB|U|954
4V4G|1|DB|G|955
4V4G|1|DB|A|956
4V4G|1|DB|G|957
*
4V4G|1|DB|C|982
4V4G|1|DB|G|983
4V4G|1|DB|A|984
4V4G|1|DB|G|985
4V4G|1|DB|A|986
4V4G|1|DB|G|987
*
4V4G|1|DB|C|998
4V4G|1|DB|A|999
4V4G|1|DB|G|1000
4V4G|1|DB|A|1001
4V4G|1|DB|C|1002
*
4V4G|1|DB|G|1174
4V4G|1|DB|A|1175
4V4G|1|DB|U|1176
4V4G|1|DB|U|1177
4V4G|1|DB|C|1178
*
4V4G|1|DB|G|1196
4V4G|1|DB|U|1197
4V4G|1|DB|C|1198
4V4G|1|DB|U|1199
4V4G|1|DB|G|1200
4V4G|1|DB|G|1201
4V4G|1|DB|U|1202
4V4G|1|DB|A|1203
4V4G|1|DB|G|1204
Current chains
- Chain DB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain D5
- 50S ribosomal protein L35
- Chain DA
- 5S ribosomal RNA; 5S rRNA
- Chain DM
- 50S ribosomal protein L15
- Chain DR
- 50S ribosomal protein L20
- Chain DS
- 50S ribosomal protein L21
- Chain DZ
- 50S ribosomal protein L30
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