3D structure

PDB id
4V7T (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to chloramphenicol.
Experimental method
X-RAY DIFFRACTION
Resolution
3.19 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
4V7T|1|BA|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7T|1|BA|C|817
4V7T|1|BA|G|818
4V7T|1|BA|A|819
4V7T|1|BA|A|820
4V7T|1|BA|A|821
4V7T|1|BA|G|822
*
4V7T|1|BA|C|835
4V7T|1|BA|G|836
4V7T|1|BA|C|837
*
4V7T|1|BA|G|942
4V7T|1|BA|A|943
4V7T|1|BA|C|944
4V7T|1|BA|A|945
4V7T|1|BA|C|946
*
4V7T|1|BA|G|971
4V7T|1|BA|A|972
4V7T|1|BA|A|973
4V7T|1|BA|G|974
4V7T|1|BA|A|975
4V7T|1|BA|G|976
*
4V7T|1|BA|C|987
4V7T|1|BA|A|988
4V7T|1|BA|G|989
4V7T|1|BA|A|990
4V7T|1|BA|C|991
*
4V7T|1|BA|G|1163
4V7T|1|BA|C|1164
*
4V7T|1|BA|G|1185
4V7T|1|BA|G|1186
4V7T|1|BA|G|1187
4V7T|1|BA|U|1188
4V7T|1|BA|A|1189
4V7T|1|BA|G|1190

Current chains

Chain BA
23S rRNA

Nearby chains

Chain B3
50S ribosomal protein L35
Chain BB
5S ribosomal RNA; 5S rRNA
Chain BL
50S ribosomal protein L15
Chain BQ
50S ribosomal protein L20
Chain BR
50S ribosomal protein L21
Chain BZ
50S ribosomal protein L30

Coloring options:

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