J7_4V85_001

3D structure

PDB id

4V85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

4V85|1|BA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V85|1|BA|C|8
4V85|1|BA|G|9
4V85|1|BA|A|10
4V85|1|BA|C|11
4V85|1|BA|U|12
4V85|1|BA|A|13
4V85|1|BA|A|14
4V85|1|BA|G|15
*
4V85|1|BA|U|525
4V85|1|BA|A|526
4V85|1|BA|C|527
4V85|1|BA|A|528
4V85|1|BA|A|529
4V85|1|BA|G|530
4V85|1|BA|C|531
*
4V85|1|BA|G|2018
4V85|1|BA|A|2019
4V85|1|BA|A|2020
4V85|1|BA|C|2021
4V85|1|BA|U|2022
4V85|1|BA|C|2023
*
4V85|1|BA|G|2040
4V85|1|BA|U|2041
4V85|1|BA|A|2042
4V85|1|BA|C|2043
*
4V85|1|BA|G|2625
4V85|1|BA|C|2626
4V85|1|BA|G|2627
4V85|1|BA|C|2628
4V85|1|BA|U|2629
4V85|1|BA|G|2630
*
4V85|1|BA|C|2788
4V85|1|BA|C|2789
*
4V85|1|BA|G|2894
4V85|1|BA|G|2895

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B4

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BN

50S ribosomal protein L13

Chain BU

50S ribosomal protein L20

Chain BW

50S ribosomal protein L22