J7_4V89_001

3D structure

PDB id

4V89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

4V89|1|BA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V89|1|BA|C|8
4V89|1|BA|G|9
4V89|1|BA|A|10
4V89|1|BA|C|11
4V89|1|BA|U|12
4V89|1|BA|A|13
4V89|1|BA|A|14
4V89|1|BA|G|15
*
4V89|1|BA|U|525
4V89|1|BA|A|526
4V89|1|BA|C|527
4V89|1|BA|A|528
4V89|1|BA|A|529
4V89|1|BA|G|530
4V89|1|BA|C|531
*
4V89|1|BA|G|2018
4V89|1|BA|A|2019
4V89|1|BA|A|2020
4V89|1|BA|C|2021
4V89|1|BA|U|2022
4V89|1|BA|C|2023
*
4V89|1|BA|G|2040
4V89|1|BA|U|2041
4V89|1|BA|A|2042
4V89|1|BA|C|2043
*
4V89|1|BA|G|2625
4V89|1|BA|C|2626
4V89|1|BA|G|2627
4V89|1|BA|C|2628
4V89|1|BA|U|2629
4V89|1|BA|G|2630
*
4V89|1|BA|C|2788
4V89|1|BA|C|2789
*
4V89|1|BA|G|2894
4V89|1|BA|G|2895

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B4

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BN

50S ribosomal protein L13

Chain BU

50S ribosomal protein L20

Chain BW

50S ribosomal protein L22