J7_4V9O_001

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

4V9O|1|AA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9O|1|AA|C|8
4V9O|1|AA|G|9
4V9O|1|AA|A|10
4V9O|1|AA|C|11
4V9O|1|AA|U|12
4V9O|1|AA|A|13
4V9O|1|AA|A|14
4V9O|1|AA|G|15
*
4V9O|1|AA|U|525
4V9O|1|AA|A|526
4V9O|1|AA|C|527
4V9O|1|AA|A|528
4V9O|1|AA|A|529
4V9O|1|AA|G|530
4V9O|1|AA|C|531
*
4V9O|1|AA|G|2018
4V9O|1|AA|A|2019
4V9O|1|AA|A|2020
4V9O|1|AA|C|2021
4V9O|1|AA|U|2022
4V9O|1|AA|C|2023
*
4V9O|1|AA|G|2040
4V9O|1|AA|U|2041
4V9O|1|AA|A|2042
4V9O|1|AA|C|2043
*
4V9O|1|AA|G|2625
4V9O|1|AA|C|2626
4V9O|1|AA|G|2627
4V9O|1|AA|C|2628
4V9O|1|AA|U|2629
4V9O|1|AA|G|2630
*
4V9O|1|AA|C|2788
4V9O|1|AA|C|2789
*
4V9O|1|AA|G|2894
4V9O|1|AA|G|2895

Current chains

Chain AA

23S rRNA

Nearby chains

Chain A0

50S ribosomal protein L32

Chain AD

50S ribosomal protein L3

Chain AJ

50S ribosomal protein L13

Chain AQ

50S ribosomal protein L20

Chain AS

50S ribosomal protein L22

Chain EG

50S ribosomal protein L6