3D structure

PDB id
4V9P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Control of ribosomal subunit rotation by elongation factor G
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
4V9P|1|AA|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V9P|1|AA|C|817
4V9P|1|AA|G|818
4V9P|1|AA|A|819
4V9P|1|AA|A|820
4V9P|1|AA|A|821
4V9P|1|AA|G|822
*
4V9P|1|AA|C|835
4V9P|1|AA|G|836
4V9P|1|AA|C|837
*
4V9P|1|AA|G|942
4V9P|1|AA|A|943
4V9P|1|AA|C|944
4V9P|1|AA|A|945
4V9P|1|AA|C|946
*
4V9P|1|AA|G|971
4V9P|1|AA|A|972
4V9P|1|AA|A|973
4V9P|1|AA|G|974
4V9P|1|AA|A|975
4V9P|1|AA|G|976
*
4V9P|1|AA|C|987
4V9P|1|AA|A|988
4V9P|1|AA|G|989
4V9P|1|AA|A|990
4V9P|1|AA|C|991
*
4V9P|1|AA|G|1163
4V9P|1|AA|C|1164
*
4V9P|1|AA|G|1185
4V9P|1|AA|G|1186
4V9P|1|AA|G|1187
4V9P|1|AA|U|1188
4V9P|1|AA|A|1189
4V9P|1|AA|G|1190

Current chains

Chain AA
23S rRNA

Nearby chains

Chain A3
50S ribosomal protein L35
Chain AB
5S ribosomal RNA; 5S rRNA
Chain AL
50S ribosomal protein L15
Chain AQ
50S ribosomal protein L20
Chain AR
50S ribosomal protein L21
Chain AZ
50S ribosomal protein L30

Coloring options:

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