J7_4V9S_001
3D structure
- PDB id
- 4V9S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antibiotic GE82832 bound to 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
- Length
- 35 nucleotides
- Bulged bases
- 4V9S|1|BA|G|555, 4V9S|1|BA|C|2043
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V9S|1|BA|A|8
4V9S|1|BA|U|9
4V9S|1|BA|G|10
4V9S|1|BA|G|11
4V9S|1|BA|U|12
4V9S|1|BA|A|13
4V9S|1|BA|A|14
4V9S|1|BA|G|15
*
4V9S|1|BA|U|550
4V9S|1|BA|A|551
4V9S|1|BA|C|552
4V9S|1|BA|A|553
4V9S|1|BA|A|554
4V9S|1|BA|G|555
4V9S|1|BA|C|556
*
4V9S|1|BA|G|2040
4V9S|1|BA|A|2041
4V9S|1|BA|A|2042
4V9S|1|BA|C|2043
4V9S|1|BA|U|2044
4V9S|1|BA|G|2045
*
4V9S|1|BA|C|2062
4V9S|1|BA|U|2063
4V9S|1|BA|A|2064
4V9S|1|BA|C|2065
*
4V9S|1|BA|G|2637
4V9S|1|BA|C|2638
4V9S|1|BA|G|2639
4V9S|1|BA|C|2640
4V9S|1|BA|A|2641
4V9S|1|BA|G|2642
*
4V9S|1|BA|C|2801
4V9S|1|BA|C|2802
*
4V9S|1|BA|G|2903
4V9S|1|BA|U|2904
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain B5
- 50S Ribosomal Protein L32
- Chain BE
- 50S Ribosomal Protein L3
- Chain BN
- 50S Ribosomal Protein L13
- Chain BU
- 50S Ribosomal Protein L20
- Chain BW
- 50S Ribosomal Protein L22
Coloring options: