J7_4WCE_001

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CC*GA

Length

35 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WCE|1|X|U|8
4WCE|1|X|U|9
4WCE|1|X|A|10
4WCE|1|X|U|11
4WCE|1|X|U|12
4WCE|1|X|A|13
4WCE|1|X|A|14
4WCE|1|X|G|15
*
4WCE|1|X|U|570
4WCE|1|X|A|571
4WCE|1|X|C|572
4WCE|1|X|A|573
4WCE|1|X|A|574
4WCE|1|X|G|575
4WCE|1|X|U|576
*
4WCE|1|X|A|2045
4WCE|1|X|U|2046
4WCE|1|X|A|2047
4WCE|1|X|G|2048
4WCE|1|X|U|2049
4WCE|1|X|A|2050
*
4WCE|1|X|U|2067
4WCE|1|X|U|2068
4WCE|1|X|A|2069
4WCE|1|X|C|2070
*
4WCE|1|X|G|2652
4WCE|1|X|C|2653
4WCE|1|X|G|2654
4WCE|1|X|U|2655
4WCE|1|X|A|2656
4WCE|1|X|G|2657
*
4WCE|1|X|C|2815
4WCE|1|X|C|2816
*
4WCE|1|X|G|2913
4WCE|1|X|A|2914

Current chains

Chain X

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain G

50S ribosomal protein L13

Chain N

50S ribosomal protein L20

Chain P

50S ribosomal protein L22

Chain Z

50S ribosomal protein L32