J7_4WFB_001

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CC*GA

Length

35 nucleotides

Bulged bases

4WFB|1|X|G|575, 4WFB|1|X|G|2048

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFB|1|X|U|8
4WFB|1|X|U|9
4WFB|1|X|A|10
4WFB|1|X|U|11
4WFB|1|X|U|12
4WFB|1|X|A|13
4WFB|1|X|A|14
4WFB|1|X|G|15
*
4WFB|1|X|U|570
4WFB|1|X|A|571
4WFB|1|X|C|572
4WFB|1|X|A|573
4WFB|1|X|A|574
4WFB|1|X|G|575
4WFB|1|X|U|576
*
4WFB|1|X|A|2045
4WFB|1|X|U|2046
4WFB|1|X|A|2047
4WFB|1|X|G|2048
4WFB|1|X|U|2049
4WFB|1|X|A|2050
*
4WFB|1|X|U|2067
4WFB|1|X|U|2068
4WFB|1|X|A|2069
4WFB|1|X|C|2070
*
4WFB|1|X|G|2652
4WFB|1|X|C|2653
4WFB|1|X|G|2654
4WFB|1|X|U|2655
4WFB|1|X|A|2656
4WFB|1|X|G|2657
*
4WFB|1|X|C|2815
4WFB|1|X|C|2816
*
4WFB|1|X|G|2913
4WFB|1|X|A|2914

Current chains

Chain X

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain G

50S ribosomal protein L13

Chain N

50S ribosomal protein L20

Chain O

50S ribosomal protein L21

Chain P

50S ribosomal protein L22

Chain Z

50S ribosomal protein L32