J7_4WOI_003
3D structure
- PDB id
- 4WOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 4WOI|1|CA|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WOI|1|CA|C|8
4WOI|1|CA|G|9
4WOI|1|CA|A|10
4WOI|1|CA|C|11
4WOI|1|CA|U|12
4WOI|1|CA|A|13
4WOI|1|CA|A|14
4WOI|1|CA|G|15
*
4WOI|1|CA|U|525
4WOI|1|CA|A|526
4WOI|1|CA|C|527
4WOI|1|CA|A|528
4WOI|1|CA|A|529
4WOI|1|CA|G|530
4WOI|1|CA|C|531
*
4WOI|1|CA|G|2018
4WOI|1|CA|A|2019
4WOI|1|CA|A|2020
4WOI|1|CA|C|2021
4WOI|1|CA|U|2022
4WOI|1|CA|C|2023
*
4WOI|1|CA|G|2040
4WOI|1|CA|U|2041
4WOI|1|CA|A|2042
4WOI|1|CA|C|2043
*
4WOI|1|CA|G|2625
4WOI|1|CA|C|2626
4WOI|1|CA|G|2627
4WOI|1|CA|C|2628
4WOI|1|CA|U|2629
4WOI|1|CA|G|2630
*
4WOI|1|CA|C|2788
4WOI|1|CA|C|2789
*
4WOI|1|CA|G|2894
4WOI|1|CA|G|2895
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain C0
- 50S ribosomal protein L32
- Chain CD
- 50S ribosomal protein L3
- Chain CJ
- 50S ribosomal protein L13
- Chain CQ
- 50S ribosomal protein L20
- Chain CR
- 50S ribosomal protein L21
- Chain CS
- 50S ribosomal protein L22
Coloring options: