J7_4WPO_001

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU

Length

35 nucleotides

Bulged bases

4WPO|1|AA|G|555, 4WPO|1|AA|C|2043

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WPO|1|AA|A|8
4WPO|1|AA|U|9
4WPO|1|AA|G|10
4WPO|1|AA|G|11
4WPO|1|AA|U|12
4WPO|1|AA|A|13
4WPO|1|AA|A|14
4WPO|1|AA|G|15
*
4WPO|1|AA|U|550
4WPO|1|AA|A|551
4WPO|1|AA|C|552
4WPO|1|AA|A|553
4WPO|1|AA|A|554
4WPO|1|AA|G|555
4WPO|1|AA|C|556
*
4WPO|1|AA|G|2040
4WPO|1|AA|A|2041
4WPO|1|AA|A|2042
4WPO|1|AA|C|2043
4WPO|1|AA|U|2044
4WPO|1|AA|G|2045
*
4WPO|1|AA|C|2062
4WPO|1|AA|U|2063
4WPO|1|AA|A|2064
4WPO|1|AA|C|2065
*
4WPO|1|AA|G|2637
4WPO|1|AA|C|2638
4WPO|1|AA|G|2639
4WPO|1|AA|C|2640
4WPO|1|AA|A|2641
4WPO|1|AA|G|2642
*
4WPO|1|AA|C|2801
4WPO|1|AA|C|2802
*
4WPO|1|AA|G|2903
4WPO|1|AA|U|2904

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A5

50S ribosomal protein L32

Chain AE

50S ribosomal protein L3

Chain AN

50S ribosomal protein L13

Chain AU

50S ribosomal protein L20

Chain AW

50S ribosomal protein L22