J7_4WQF_001

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU

Length

35 nucleotides

Bulged bases

4WQF|1|AA|G|555, 4WQF|1|AA|C|2043

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQF|1|AA|A|8
4WQF|1|AA|U|9
4WQF|1|AA|G|10
4WQF|1|AA|G|11
4WQF|1|AA|U|12
4WQF|1|AA|A|13
4WQF|1|AA|A|14
4WQF|1|AA|G|15
*
4WQF|1|AA|U|550
4WQF|1|AA|A|551
4WQF|1|AA|C|552
4WQF|1|AA|A|553
4WQF|1|AA|A|554
4WQF|1|AA|G|555
4WQF|1|AA|C|556
*
4WQF|1|AA|G|2040
4WQF|1|AA|A|2041
4WQF|1|AA|A|2042
4WQF|1|AA|C|2043
4WQF|1|AA|U|2044
4WQF|1|AA|G|2045
*
4WQF|1|AA|C|2062
4WQF|1|AA|U|2063
4WQF|1|AA|A|2064
4WQF|1|AA|C|2065
*
4WQF|1|AA|G|2637
4WQF|1|AA|C|2638
4WQF|1|AA|G|2639
4WQF|1|AA|C|2640
4WQF|1|AA|A|2641
4WQF|1|AA|G|2642
*
4WQF|1|AA|C|2801
4WQF|1|AA|C|2802
*
4WQF|1|AA|G|2903
4WQF|1|AA|U|2904

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A5

50S ribosomal protein L32

Chain AE

50S ribosomal protein L3

Chain AN

50S ribosomal protein L13

Chain AU

50S ribosomal protein L20

Chain AW

50S ribosomal protein L22