J7_4WRA_003
3D structure
- PDB id
- 4WRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
- Length
- 35 nucleotides
- Bulged bases
- 4WRA|1|1H|G|530, 4WRA|1|1H|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WRA|1|1H|A|8
4WRA|1|1H|U|9
4WRA|1|1H|G|10
4WRA|1|1H|G|11
4WRA|1|1H|U|12
4WRA|1|1H|A|13
4WRA|1|1H|A|14
4WRA|1|1H|G|15
*
4WRA|1|1H|U|525
4WRA|1|1H|A|526
4WRA|1|1H|C|527
4WRA|1|1H|A|528
4WRA|1|1H|A|529
4WRA|1|1H|G|530
4WRA|1|1H|C|531
*
4WRA|1|1H|G|2018
4WRA|1|1H|A|2019
4WRA|1|1H|A|2020
4WRA|1|1H|C|2021
4WRA|1|1H|U|2022
4WRA|1|1H|G|2023
*
4WRA|1|1H|C|2040
4WRA|1|1H|U|2041
4WRA|1|1H|A|2042
4WRA|1|1H|C|2043
*
4WRA|1|1H|G|2625
4WRA|1|1H|C|2626
4WRA|1|1H|G|2627
4WRA|1|1H|C|2628
4WRA|1|1H|A|2629
4WRA|1|1H|G|2630
*
4WRA|1|1H|C|2788
4WRA|1|1H|C|2789
*
4WRA|1|1H|G|2894
4WRA|1|1H|U|2895
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L3
- Chain 58
- 50S ribosomal protein L13
- Chain C8
- 50S ribosomal protein L20
- Chain E8
- 50S ribosomal protein L22
- Chain N8
- 50S ribosomal protein L32
Coloring options: