J7_4WSM_001

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG

Length

32 nucleotides

Bulged bases

4WSM|1|14|A|945, 4WSM|1|14|C|974|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WSM|1|14|C|817
4WSM|1|14|G|818
4WSM|1|14|A|819
4WSM|1|14|A|820
4WSM|1|14|A|821
4WSM|1|14|U|822
*
4WSM|1|14|A|835
4WSM|1|14|G|836
*
4WSM|1|14|U|943
4WSM|1|14|G|944
4WSM|1|14|A|945
4WSM|1|14|G|946
*
4WSM|1|14|C|971
4WSM|1|14|G|972
4WSM|1|14|A|973
4WSM|1|14|G|974
4WSM|1|14|C|974|||A
4WSM|1|14|G|975
4WSM|1|14|C|976
*
4WSM|1|14|G|987
4WSM|1|14|A|988
4WSM|1|14|G|989
4WSM|1|14|A|990
4WSM|1|14|C|991
*
4WSM|1|14|G|1163
4WSM|1|14|G|1164
*
4WSM|1|14|C|1185
4WSM|1|14|G|1186
4WSM|1|14|G|1187
4WSM|1|14|U|1188
4WSM|1|14|A|1189
4WSM|1|14|G|1190

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 1J

5S ribosomal RNA; 5S rRNA

Chain 35

50S ribosomal protein L15

Chain 85

50S ribosomal protein L20

Chain 95

50S ribosomal protein L21

Chain H5

50S ribosomal protein L30