Loop J7_4WZD

3D structure

PDB id: 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
Description: Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å

Loop

Sequence: AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
Length: 35 nucleotides
Bulged bases: 4WZD|1|1H|G|530||||P_1, 4WZD|1|1H|C|2021||||P_1
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4WZD|1|1H|A|8||||P_1
4WZD|1|1H|U|9||||P_1
4WZD|1|1H|G|10||||P_1
4WZD|1|1H|G|11||||P_1
4WZD|1|1H|U|12||||P_1
4WZD|1|1H|A|13||||P_1
4WZD|1|1H|A|14||||P_1
4WZD|1|1H|G|15||||P_1
*
4WZD|1|1H|U|525||||P_1
4WZD|1|1H|A|526||||P_1
4WZD|1|1H|C|527||||P_1
4WZD|1|1H|A|528||||P_1
4WZD|1|1H|A|529||||P_1
4WZD|1|1H|G|530||||P_1
4WZD|1|1H|C|531||||P_1
*
4WZD|1|1H|G|2018||||P_1
4WZD|1|1H|A|2019||||P_1
4WZD|1|1H|A|2020||||P_1
4WZD|1|1H|C|2021||||P_1
4WZD|1|1H|U|2022||||P_1
4WZD|1|1H|G|2023||||P_1
*
4WZD|1|1H|C|2040||||P_1
4WZD|1|1H|U|2041||||P_1
4WZD|1|1H|A|2042||||P_1
4WZD|1|1H|C|2043||||P_1
*
4WZD|1|1H|G|2625||||P_1
4WZD|1|1H|C|2626||||P_1
4WZD|1|1H|G|2627||||P_1
4WZD|1|1H|C|2628||||P_1
4WZD|1|1H|A|2629||||P_1
4WZD|1|1H|G|2630||||P_1
*
4WZD|1|1H|C|2788||||P_1
4WZD|1|1H|C|2789||||P_1
*
4WZD|1|1H|G|2894||||P_1
4WZD|1|1H|U|2895||||P_1

Current chains

Chain 1H: 23S ribosomal RNA

Nearby chains

Chain 21: 50S ribosomal protein L3
Chain 58: 50S ribosomal protein L13
Chain C8: 50S ribosomal protein L20
Chain E8: 50S ribosomal protein L22
Chain N8: 50S ribosomal protein L32

J7_4WZD_002