J7_4Z3S_001

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU

Length

35 nucleotides

Bulged bases

4Z3S|1|1A|G|530, 4Z3S|1|1A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4Z3S|1|1A|A|8
4Z3S|1|1A|U|9
4Z3S|1|1A|G|10
4Z3S|1|1A|G|11
4Z3S|1|1A|U|12
4Z3S|1|1A|A|13
4Z3S|1|1A|A|14
4Z3S|1|1A|G|15
*
4Z3S|1|1A|U|525
4Z3S|1|1A|A|526
4Z3S|1|1A|C|527
4Z3S|1|1A|A|528
4Z3S|1|1A|A|529
4Z3S|1|1A|G|530
4Z3S|1|1A|C|531
*
4Z3S|1|1A|G|2018
4Z3S|1|1A|A|2019
4Z3S|1|1A|A|2020
4Z3S|1|1A|C|2021
4Z3S|1|1A|U|2022
4Z3S|1|1A|G|2023
*
4Z3S|1|1A|C|2040
4Z3S|1|1A|U|2041
4Z3S|1|1A|A|2042
4Z3S|1|1A|C|2043
*
4Z3S|1|1A|G|2625
4Z3S|1|1A|C|2626
4Z3S|1|1A|G|2627
4Z3S|1|1A|C|2628
4Z3S|1|1A|A|2629
4Z3S|1|1A|G|2630
*
4Z3S|1|1A|C|2788
4Z3S|1|1A|C|2789
*
4Z3S|1|1A|G|2894
4Z3S|1|1A|U|2895

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L32

Chain 1E

50S ribosomal protein L3

Chain 1N

50S ribosomal protein L13

Chain 1U

50S ribosomal protein L20

Chain 1W

50S ribosomal protein L22