J7_4Z3S_003

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG

Length

32 nucleotides

Bulged bases

4Z3S|1|2A|A|945, 4Z3S|1|2A|C|975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4Z3S|1|2A|C|817
4Z3S|1|2A|G|818
4Z3S|1|2A|A|819
4Z3S|1|2A|A|820
4Z3S|1|2A|A|821
4Z3S|1|2A|U|822
*
4Z3S|1|2A|A|835
4Z3S|1|2A|G|836
*
4Z3S|1|2A|U|943
4Z3S|1|2A|G|944
4Z3S|1|2A|A|945
4Z3S|1|2A|G|946
*
4Z3S|1|2A|C|971
4Z3S|1|2A|G|972
4Z3S|1|2A|A|973
4Z3S|1|2A|G|974
4Z3S|1|2A|C|975
4Z3S|1|2A|G|975|||A
4Z3S|1|2A|C|976
*
4Z3S|1|2A|G|987
4Z3S|1|2A|A|988
4Z3S|1|2A|G|989
4Z3S|1|2A|A|990
4Z3S|1|2A|C|991
*
4Z3S|1|2A|G|1163
4Z3S|1|2A|G|1164
*
4Z3S|1|2A|C|1185
4Z3S|1|2A|G|1186
4Z3S|1|2A|G|1187
4Z3S|1|2A|U|1188
4Z3S|1|2A|A|1189
4Z3S|1|2A|G|1190

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 23

50S ribosomal protein L30

Chain 28

50S ribosomal protein L35

Chain 2B

5S ribosomal RNA; 5S rRNA

Chain 2P

50S ribosomal protein L15

Chain 2U

50S ribosomal protein L20

Chain 2V

50S ribosomal protein L21