J7_5AA0_001
3D structure
- PDB id
- 5AA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CGAAAU*AGC*GUGAG*CGAGCGC*GAGAC*GG*CGGUAG
- Length
- 34 nucleotides
- Bulged bases
- 5AA0|1|AA|G|944||||P_1, 5AA0|1|AA|A|945||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AA0|1|AA|C|817||||P_1
5AA0|1|AA|G|818||||P_1
5AA0|1|AA|A|819||||P_1
5AA0|1|AA|A|820||||P_1
5AA0|1|AA|A|821||||P_1
5AA0|1|AA|U|822||||P_1
*
5AA0|1|AA|A|835||||P_1
5AA0|1|AA|G|836||||P_1
5AA0|1|AA|C|837||||P_1
*
5AA0|1|AA|G|942||||P_1
5AA0|1|AA|U|943||||P_1
5AA0|1|AA|G|944||||P_1
5AA0|1|AA|A|945||||P_1
5AA0|1|AA|G|946||||P_1
*
5AA0|1|AA|C|971||||P_1
5AA0|1|AA|G|972||||P_1
5AA0|1|AA|A|973||||P_1
5AA0|1|AA|G|974||||P_1
5AA0|1|AA|C|974|||A|P_1
5AA0|1|AA|G|975||||P_1
5AA0|1|AA|C|976||||P_1
*
5AA0|1|AA|G|987||||P_1
5AA0|1|AA|A|988||||P_1
5AA0|1|AA|G|989||||P_1
5AA0|1|AA|A|990||||P_1
5AA0|1|AA|C|991||||P_1
*
5AA0|1|AA|G|1163||||P_1
5AA0|1|AA|G|1164||||P_1
*
5AA0|1|AA|C|1185||||P_1
5AA0|1|AA|G|1186||||P_1
5AA0|1|AA|G|1187||||P_1
5AA0|1|AA|U|1188||||P_1
5AA0|1|AA|A|1189||||P_1
5AA0|1|AA|G|1190||||P_1
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AB
- 5S ribosomal RNA; 5S rRNA
- Chain AM
- 50S ribosomal protein L15
- Chain AR
- 50S ribosomal protein L20
- Chain AS
- 50S ribosomal protein L21
- Chain AZ
- 50S ribosomal protein L30
- Chain Ae
- 50S ribosomal protein L35
Coloring options: