J7_5EL6_002
3D structure
- PDB id
- 5EL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
- Length
- 35 nucleotides
- Bulged bases
- 5EL6|1|1H|G|530, 5EL6|1|1H|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5EL6|1|1H|A|8
5EL6|1|1H|U|9
5EL6|1|1H|G|10
5EL6|1|1H|G|11
5EL6|1|1H|U|12
5EL6|1|1H|A|13
5EL6|1|1H|A|14
5EL6|1|1H|G|15
*
5EL6|1|1H|U|525
5EL6|1|1H|A|526
5EL6|1|1H|C|527
5EL6|1|1H|A|528
5EL6|1|1H|A|529
5EL6|1|1H|G|530
5EL6|1|1H|C|531
*
5EL6|1|1H|G|2018
5EL6|1|1H|A|2019
5EL6|1|1H|A|2020
5EL6|1|1H|C|2021
5EL6|1|1H|U|2022
5EL6|1|1H|G|2023
*
5EL6|1|1H|C|2040
5EL6|1|1H|U|2041
5EL6|1|1H|A|2042
5EL6|1|1H|C|2043
*
5EL6|1|1H|G|2625
5EL6|1|1H|C|2626
5EL6|1|1H|G|2627
5EL6|1|1H|C|2628
5EL6|1|1H|A|2629
5EL6|1|1H|G|2630
*
5EL6|1|1H|C|2788
5EL6|1|1H|C|2789
*
5EL6|1|1H|G|2894
5EL6|1|1H|U|2895
Current chains
- Chain 1H
- 23S rRNA
Nearby chains
- Chain 21
- 50S ribosomal protein L3
- Chain 58
- 50S ribosomal protein L13
- Chain C8
- 50S ribosomal protein L20
- Chain E8
- 50S ribosomal protein L22
- Chain N8
- 50S ribosomal protein L32
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