J7_5HAU_001
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CC*GU
- Length
- 35 nucleotides
- Bulged bases
- 5HAU|1|1A|G|554, 5HAU|1|1A|C|2042
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5HAU|1|1A|A|7
5HAU|1|1A|U|8
5HAU|1|1A|G|9
5HAU|1|1A|G|10
5HAU|1|1A|U|11
5HAU|1|1A|A|12
5HAU|1|1A|A|13
5HAU|1|1A|G|14
*
5HAU|1|1A|U|549
5HAU|1|1A|A|550
5HAU|1|1A|C|551
5HAU|1|1A|A|552
5HAU|1|1A|A|553
5HAU|1|1A|G|554
5HAU|1|1A|C|555
*
5HAU|1|1A|G|2039
5HAU|1|1A|A|2040
5HAU|1|1A|A|2041
5HAU|1|1A|C|2042
5HAU|1|1A|U|2043
5HAU|1|1A|G|2044
*
5HAU|1|1A|C|2061
5HAU|1|1A|U|2062
5HAU|1|1A|A|2063
5HAU|1|1A|C|2064
*
5HAU|1|1A|G|2636
5HAU|1|1A|C|2637
5HAU|1|1A|G|2638
5HAU|1|1A|C|2639
5HAU|1|1A|A|2640
5HAU|1|1A|G|2641
*
5HAU|1|1A|C|2800
5HAU|1|1A|C|2801
*
5HAU|1|1A|G|2902
5HAU|1|1A|U|2903
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 13
- 50S ribosomal protein L32
- Chain 1E
- 50S ribosomal protein L3
- Chain 1L
- 50S ribosomal protein L13
- Chain 1S
- 50S ribosomal protein L20
- Chain 1U
- 50S ribosomal protein L22
Coloring options: