J7_5J91_001
3D structure
- PDB id
- 5J91 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Wild-type 70S E coli ribosome bound to Tigecycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.96 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 5J91|1|CA|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5J91|1|CA|C|8
5J91|1|CA|G|9
5J91|1|CA|A|10
5J91|1|CA|C|11
5J91|1|CA|U|12
5J91|1|CA|A|13
5J91|1|CA|A|14
5J91|1|CA|G|15
*
5J91|1|CA|U|525
5J91|1|CA|A|526
5J91|1|CA|C|527
5J91|1|CA|A|528
5J91|1|CA|A|529
5J91|1|CA|G|530
5J91|1|CA|C|531
*
5J91|1|CA|G|2018
5J91|1|CA|A|2019
5J91|1|CA|A|2020
5J91|1|CA|C|2021
5J91|1|CA|U|2022
5J91|1|CA|C|2023
*
5J91|1|CA|G|2040
5J91|1|CA|U|2041
5J91|1|CA|A|2042
5J91|1|CA|C|2043
*
5J91|1|CA|G|2625
5J91|1|CA|C|2626
5J91|1|CA|G|2627
5J91|1|CA|C|2628
5J91|1|CA|U|2629
5J91|1|CA|G|2630
*
5J91|1|CA|C|2788
5J91|1|CA|C|2789
*
5J91|1|CA|G|2894
5J91|1|CA|G|2895
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain C1
- 50S ribosomal protein L32
- Chain CD
- 50S ribosomal protein L3
- Chain CK
- 50S ribosomal protein L13
- Chain CR
- 50S ribosomal protein L20
- Chain CS
- 50S ribosomal protein L21
- Chain CT
- 50S ribosomal protein L22
Coloring options: