J7_5KPW_001

3D structure

PDB id

5KPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

5KPW|1|27|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPW|1|27|C|8
5KPW|1|27|G|9
5KPW|1|27|A|10
5KPW|1|27|C|11
5KPW|1|27|U|12
5KPW|1|27|A|13
5KPW|1|27|A|14
5KPW|1|27|G|15
*
5KPW|1|27|U|525
5KPW|1|27|A|526
5KPW|1|27|C|527
5KPW|1|27|A|528
5KPW|1|27|A|529
5KPW|1|27|G|530
5KPW|1|27|C|531
*
5KPW|1|27|G|2018
5KPW|1|27|A|2019
5KPW|1|27|A|2020
5KPW|1|27|C|2021
5KPW|1|27|U|2022
5KPW|1|27|C|2023
*
5KPW|1|27|G|2040
5KPW|1|27|U|2041
5KPW|1|27|A|2042
5KPW|1|27|C|2043
*
5KPW|1|27|G|2625
5KPW|1|27|C|2626
5KPW|1|27|G|2627
5KPW|1|27|C|2628
5KPW|1|27|U|2629
5KPW|1|27|G|2630
*
5KPW|1|27|C|2788
5KPW|1|27|C|2789
*
5KPW|1|27|G|2894
5KPW|1|27|G|2895

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L32

Chain B

50S ribosomal protein L3

Chain I

50S ribosomal protein L13

Chain P

50S ribosomal protein L20

Chain R

50S ribosomal protein L22