J7_5KPX_002
3D structure
- PDB id
- 5KPX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 5KPX|1|27|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5KPX|1|27|C|817
5KPX|1|27|G|818
5KPX|1|27|A|819
5KPX|1|27|A|820
5KPX|1|27|A|821
5KPX|1|27|G|822
*
5KPX|1|27|C|835
5KPX|1|27|G|836
5KPX|1|27|C|837
5KPX|1|27|C|838
*
5KPX|1|27|G|940
5KPX|1|27|A|941
5KPX|1|27|G|942
5KPX|1|27|A|943
5KPX|1|27|C|944
5KPX|1|27|A|945
5KPX|1|27|C|946
*
5KPX|1|27|G|971
5KPX|1|27|A|972
5KPX|1|27|A|973
5KPX|1|27|G|974
5KPX|1|27|A|975
5KPX|1|27|G|976
*
5KPX|1|27|C|987
5KPX|1|27|A|988
5KPX|1|27|G|989
5KPX|1|27|A|990
5KPX|1|27|C|991
*
5KPX|1|27|G|1163
5KPX|1|27|C|1164
*
5KPX|1|27|G|1185
5KPX|1|27|G|1186
5KPX|1|27|G|1187
5KPX|1|27|U|1188
5KPX|1|27|A|1189
5KPX|1|27|G|1190
Current chains
- Chain 27
- 23S ribosomal RNA
Nearby chains
- Chain 28
- 5S ribosomal RNA; 5S rRNA
- Chain 4
- 50S ribosomal protein L35
- Chain K
- 50S ribosomal protein L15
- Chain P
- 50S ribosomal protein L20
- Chain Q
- 50S ribosomal protein L21
- Chain Y
- 50S ribosomal protein L30
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