J7_5MLC_002
3D structure
- PDB id
- 5MLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGAG*CGGAU*GG*CGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 5MLC|1|A|A|973
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MLC|1|A|C|828
5MLC|1|A|G|829
5MLC|1|A|A|830
5MLC|1|A|A|831
5MLC|1|A|A|832
5MLC|1|A|U|833
*
5MLC|1|A|A|846
5MLC|1|A|G|847
*
5MLC|1|A|U|971
5MLC|1|A|G|972
5MLC|1|A|A|973
5MLC|1|A|G|974
*
5MLC|1|A|C|999
5MLC|1|A|G|1000
5MLC|1|A|A|1001
5MLC|1|A|G|1002
5MLC|1|A|A|1003
5MLC|1|A|G|1004
*
5MLC|1|A|C|1015
5MLC|1|A|G|1016
5MLC|1|A|G|1017
5MLC|1|A|A|1018
5MLC|1|A|U|1019
*
5MLC|1|A|G|1190
5MLC|1|A|G|1191
*
5MLC|1|A|C|1206
5MLC|1|A|G|1207
5MLC|1|A|G|1208
5MLC|1|A|U|1209
5MLC|1|A|A|1210
5MLC|1|A|G|1211
Current chains
- Chain A
- 23S ribosomal RNA, chloroplastic
Nearby chains
- Chain 5
- 50S ribosomal protein L35, chloroplastic
- Chain 8
- PSRP6, chloroplastic
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain N
- 50S ribosomal protein L15, chloroplastic
- Chain S
- 50S ribosomal protein L20, chloroplastic
- Chain T
- 50S ribosomal protein L21, chloroplastic
Coloring options: