3D structure

PDB id
5MRC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial ribosome - Class A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.25 Å

Loop

Sequence
UGAAAU*AG*UCAG*CUAAAG*CAGAU*AA*UGGUAA
Length
31 nucleotides
Bulged bases
5MRC|1|A|A|871
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5MRC|1|A|U|708
5MRC|1|A|G|709
5MRC|1|A|A|710
5MRC|1|A|A|711
5MRC|1|A|A|712
5MRC|1|A|U|713
*
5MRC|1|A|A|726
5MRC|1|A|G|727
*
5MRC|1|A|U|869
5MRC|1|A|C|870
5MRC|1|A|A|871
5MRC|1|A|G|872
*
5MRC|1|A|C|897
5MRC|1|A|U|898
5MRC|1|A|A|899
5MRC|1|A|A|900
5MRC|1|A|A|901
5MRC|1|A|G|902
*
5MRC|1|A|C|913
5MRC|1|A|A|914
5MRC|1|A|G|915
5MRC|1|A|A|916
5MRC|1|A|U|917
*
5MRC|1|A|A|1183
5MRC|1|A|A|1184
*
5MRC|1|A|U|1219
5MRC|1|A|G|1220
5MRC|1|A|G|1221
5MRC|1|A|U|1222
5MRC|1|A|A|1223
5MRC|1|A|A|1224

Current chains

Chain A
21S ribosomal RNA

Nearby chains

Chain 4
mL43
Chain J
uL15m
Chain N
bL21m
Chain U
uL30m
Chain Z
bL35m
Chain c
mL60

Coloring options:

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