J7_5NWY_002
3D structure
- PDB id
- 5NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 5NWY|1|N|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5NWY|1|N|C|817
5NWY|1|N|G|818
5NWY|1|N|A|819
5NWY|1|N|A|820
5NWY|1|N|A|821
5NWY|1|N|G|822
*
5NWY|1|N|C|835
5NWY|1|N|G|836
5NWY|1|N|C|837
5NWY|1|N|C|838
*
5NWY|1|N|G|940
5NWY|1|N|A|941
5NWY|1|N|G|942
5NWY|1|N|A|943
5NWY|1|N|C|944
5NWY|1|N|A|945
5NWY|1|N|C|946
*
5NWY|1|N|G|971
5NWY|1|N|A|972
5NWY|1|N|A|973
5NWY|1|N|G|974
5NWY|1|N|A|975
5NWY|1|N|G|976
*
5NWY|1|N|C|987
5NWY|1|N|A|988
5NWY|1|N|G|989
5NWY|1|N|A|990
5NWY|1|N|C|991
*
5NWY|1|N|G|1163
5NWY|1|N|C|1164
*
5NWY|1|N|G|1185
5NWY|1|N|G|1186
5NWY|1|N|G|1187
5NWY|1|N|U|1188
5NWY|1|N|A|1189
5NWY|1|N|G|1190
Current chains
- Chain N
- 23S rRNA
Nearby chains
- Chain O
- 5S ribosomal RNA; 5S rRNA
- Chain Y
- 50S ribosomal protein L15
- Chain d
- 50S ribosomal protein L20
- Chain e
- 50S ribosomal protein L21
- Chain m
- 50S ribosomal protein L30
- Chain q
- 50S ribosomal protein L35
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