J7_5TBW_001
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 5TBW|1|1|G|1116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J7_79100.1
- Basepair signature
- cWW-tSH-tHW-cSH-F-F-F-cWW-cWW-cWW-cWW-F-F-cWW-cWH-F-F-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
5TBW|1|1|C|949
5TBW|1|1|G|950
5TBW|1|1|A|951
5TBW|1|1|A|952
5TBW|1|1|G|953
5TBW|1|1|U|954
*
5TBW|1|1|A|967
5TBW|1|1|G|968
*
5TBW|1|1|U|1114
5TBW|1|1|G|1115
5TBW|1|1|G|1116
5TBW|1|1|G|1117
*
5TBW|1|1|C|1141
5TBW|1|1|G|1142
5TBW|1|1|A|1143
5TBW|1|1|U|1144
5TBW|1|1|G|1145
5TBW|1|1|C|1146
*
5TBW|1|1|G|1157
5TBW|1|1|A|1158
5TBW|1|1|A|1159
5TBW|1|1|C|1160
5TBW|1|1|G|1161
*
5TBW|1|1|C|1338
5TBW|1|1|C|1339
*
5TBW|1|1|G|1365
5TBW|1|1|A|1366
5TBW|1|1|G|1367
5TBW|1|1|U|1368
5TBW|1|1|A|1369
5TBW|1|1|G|1370
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 2
- 60S ribosomal protein L21-A
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain AB
- 60S ribosomal protein L28
- Chain AC
- 60S ribosomal protein L29
- Chain AF
- 60S ribosomal protein L32
- Chain AG
- 60S ribosomal protein L33-A
- Chain l
- 60S ribosomal protein L4-A
- Chain o
- 60S ribosomal protein L7-A
- Chain t
- 60S ribosomal protein L13-A
- Chain y
- 60S ribosomal protein L18-A
Coloring options: