J7_5U9F_001
3D structure
- PDB id
- 5U9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 5U9F|1|01|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5U9F|1|01|C|8
5U9F|1|01|G|9
5U9F|1|01|A|10
5U9F|1|01|C|11
5U9F|1|01|U|12
5U9F|1|01|A|13
5U9F|1|01|A|14
5U9F|1|01|G|15
*
5U9F|1|01|U|525
5U9F|1|01|A|526
5U9F|1|01|C|527
5U9F|1|01|A|528
5U9F|1|01|A|529
5U9F|1|01|G|530
5U9F|1|01|C|531
*
5U9F|1|01|G|2018
5U9F|1|01|A|2019
5U9F|1|01|A|2020
5U9F|1|01|C|2021
5U9F|1|01|U|2022
5U9F|1|01|C|2023
*
5U9F|1|01|G|2040
5U9F|1|01|U|2041
5U9F|1|01|A|2042
5U9F|1|01|C|2043
*
5U9F|1|01|G|2625
5U9F|1|01|C|2626
5U9F|1|01|G|2627
5U9F|1|01|C|2628
5U9F|1|01|U|2629
5U9F|1|01|G|2630
*
5U9F|1|01|C|2788
5U9F|1|01|C|2789
*
5U9F|1|01|G|2894
5U9F|1|01|G|2895
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 05
- 50S ribosomal protein L3
- Chain 12
- 50S ribosomal protein L13
- Chain 19
- 50S ribosomal protein L20
- Chain 21
- 50S ribosomal protein L22
- Chain 30
- 50S ribosomal protein L32
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