J7_5UQ7_002
3D structure
- PDB id
- 5UQ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
- Length
- 32 nucleotides
- Bulged bases
- 5UQ7|1|A|A|945, 5UQ7|1|A|C|975|||A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5UQ7|1|A|C|817
5UQ7|1|A|G|818
5UQ7|1|A|A|819
5UQ7|1|A|A|820
5UQ7|1|A|A|821
5UQ7|1|A|U|822
*
5UQ7|1|A|A|835
5UQ7|1|A|G|836
*
5UQ7|1|A|U|943
5UQ7|1|A|G|944
5UQ7|1|A|A|945
5UQ7|1|A|G|946
*
5UQ7|1|A|C|971
5UQ7|1|A|G|972
5UQ7|1|A|A|973
5UQ7|1|A|G|974
5UQ7|1|A|C|975|||A
5UQ7|1|A|G|975|||B
5UQ7|1|A|C|976
*
5UQ7|1|A|G|987
5UQ7|1|A|A|988
5UQ7|1|A|G|989
5UQ7|1|A|A|990
5UQ7|1|A|C|991
*
5UQ7|1|A|G|1163
5UQ7|1|A|G|1164
*
5UQ7|1|A|C|1185
5UQ7|1|A|G|1186
5UQ7|1|A|G|1187
5UQ7|1|A|U|1188
5UQ7|1|A|A|1189
5UQ7|1|A|G|1190
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L30
- Chain 8
- 50S ribosomal protein L35
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain P
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L20
- Chain V
- 50S ribosomal protein L21
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