J7_5WE4_001

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

5WE4|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WE4|1|A|C|8
5WE4|1|A|G|9
5WE4|1|A|A|10
5WE4|1|A|C|11
5WE4|1|A|U|12
5WE4|1|A|A|13
5WE4|1|A|A|14
5WE4|1|A|G|15
*
5WE4|1|A|U|525
5WE4|1|A|A|526
5WE4|1|A|C|527
5WE4|1|A|A|528
5WE4|1|A|A|529
5WE4|1|A|G|530
5WE4|1|A|C|531
*
5WE4|1|A|G|2018
5WE4|1|A|A|2019
5WE4|1|A|A|2020
5WE4|1|A|C|2021
5WE4|1|A|U|2022
5WE4|1|A|C|2023
*
5WE4|1|A|G|2040
5WE4|1|A|U|2041
5WE4|1|A|A|2042
5WE4|1|A|C|2043
*
5WE4|1|A|G|2625
5WE4|1|A|C|2626
5WE4|1|A|G|2627
5WE4|1|A|C|2628
5WE4|1|A|U|2629
5WE4|1|A|G|2630
*
5WE4|1|A|C|2788
5WE4|1|A|C|2789
*
5WE4|1|A|G|2894
5WE4|1|A|G|2895

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22