J7_5WE6_001

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

5WE6|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WE6|1|A|C|8
5WE6|1|A|G|9
5WE6|1|A|A|10
5WE6|1|A|C|11
5WE6|1|A|U|12
5WE6|1|A|A|13
5WE6|1|A|A|14
5WE6|1|A|G|15
*
5WE6|1|A|U|525
5WE6|1|A|A|526
5WE6|1|A|C|527
5WE6|1|A|A|528
5WE6|1|A|A|529
5WE6|1|A|G|530
5WE6|1|A|C|531
*
5WE6|1|A|G|2018
5WE6|1|A|A|2019
5WE6|1|A|A|2020
5WE6|1|A|C|2021
5WE6|1|A|U|2022
5WE6|1|A|C|2023
*
5WE6|1|A|G|2040
5WE6|1|A|U|2041
5WE6|1|A|A|2042
5WE6|1|A|C|2043
*
5WE6|1|A|G|2625
5WE6|1|A|C|2626
5WE6|1|A|G|2627
5WE6|1|A|C|2628
5WE6|1|A|U|2629
5WE6|1|A|G|2630
*
5WE6|1|A|C|2788
5WE6|1|A|C|2789
*
5WE6|1|A|G|2894
5WE6|1|A|G|2895

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22